Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885795.1_cds_XP_016439883.1_35392
CDS Infomation

[gene=LOC107765719] [db_xref=GeneID:107765719] [protein=DEAD-box ATP-dependent RNA helicase 42-like isoform X6] [protein_id=XP_016439883.1] [location=complement(join(5959..6044,6956..7166,7550..7647,7999..8148,8803..9045,9142..9255,10758..10848))] [gbkey=CDS]
Sequence

ATGGGAGCCAAGGACTTGCAGAAGGAGCTAAAGAAAAAGAAGAACAAAGATGCGGAATCC
CTGACTATAAACTCTAACCTTGTTCAAAATGAGGAAAATTTTGCTAAGGTAACAGAAGAA
AAGAATAGGAAGAAGAAGAAACTGACACTGCAAAACAGAAGAAGCAAGGATGAAATAGAT
GAATGCCATCTATCATATGATAAAGATAATGCAGATGGGGAAAAGAAAAAGAGCAAATCA
TCAAAGCAGAAAAAGAGGAAAAATGACACACTTGCTGAAAGTGGTGTAGTTGATCAATCT
AATAACGTAGAGGATGGACTTGGTCAAGAAAATACCTTATCGAGTGAACCTGATAAGCCG
GAGAAAAGAAAATCGAAGGGAAAGAAGAGAAAAAGCGAAAAGAAAGCTGGGAAAACTGAG
GGTAATGATTTCTCAAAACGACAAAAAGGCAAGTCAAAAGAGCCCCACAAAATTGTTGAG
AAGGATCGTCCATCTTCAATAGCTGAGGATGATTTGTCTGAGAAGACAGAACAAGCTGAA
GATGAAGAGATTTATGAGCTATCTTCAGGGGATGAGGATTACTCTAAAGGAGTGAGAAAG
TGGGTTACAGATTATTATCAGAGTAGGCCAGGGATAAAGGTGTTGCAAGAAAGGATTGAT
GAGTTTATAACTGATCATGAGGCGAAAAAAGAACAGGAAAGGAAAGAAAAAGAAGCCCGT
GCTGCTGAAGGTGGATGGACCGTTGTTGTACACCACAAAGGCAGGAAGAAGACAACGGAT
TCTGAAACTGGAATTGCAGTTGGTTCTGTTTCTCAGACTGCTGTTATGGATAATATGGCC
AAAAAGAAAAAGAATGATGTGGGATTAGATTTCTACCGGTTTCAGAAGAGAGAAGCAAAA
AGAAATGAGATCATGGTGCTGCAGAGCAAATTTGAGCAGGATAAGAAGCGGATACAGCAG
TTGAGGGCTGCAAGAAAATTTCGACCTTACTGA

Peptide Sequence

PEP ID

XP_016439883.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform X6 [Nicotiana tabacum]
Sequence

MGAKDLQKELKKKKNKDAESLTINSNLVQNEENFAKVTEEKNRKKKKLTLQNRRSKDEID
ECHLSYDKDNADGEKKKSKSSKQKKRKNDTLAESGVVDQSNNVEDGLGQENTLSSEPDKP
EKRKSKGKKRKSEKKAGKTEGNDFSKRQKGKSKEPHKIVEKDRPSSIAEDDLSEKTEQAE
DEEIYELSSGDEDYSKGVRKWVTDYYQSRPGIKVLQERIDEFITDHEAKKEQERKEKEAR
AAEGGWTVVVHHKGRKKTTDSETGIAVGSVSQTAVMDNMAKKKKNDVGLDFYRFQKREAK
RNEIMVLQSKFEQDKKRIQQLRAARKFRPY

Transcript Sequence

Gene sequence data has not been registered.